The Programming Language Perl For Biologists
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The Programming Language Perl For Biologists
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Author : Asheesh Shanker
language : de
Publisher:
Release Date : 2015-03-09
The Programming Language Perl For Biologists written by Asheesh Shanker and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-03-09 with categories.
Document from the year 2015 in the subject Computer Science - Programming, course: Bioinformatics, language: English, abstract: This book is designed to be useful in theory and practical classes of UG and PG bioinformatics students. Moreover, it will be beneficial to other persons who wish to learn Perl programming language. To explain the Perl jargon, program based approach is used throughout the book. Important points are provided at the end of each chapter along with questions to test the skills. Solutions of find errors are provided at the end of the book. All the programs are tested on Windows 7 with Perl v5.18.1. The book is divided into thirteen chapters which gradually take a reader from basic to advanced Perl. Although the book has been drafted with utmost care, it is quite possible that some errors/misprints might have crept in the book. I request the readers for their valuable suggestions and comments for further improvement of the book.
The Programming Language Perl For Biologists
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Author : Asheesh Shanker
language : en
Publisher: GRIN Verlag
Release Date : 2015-03-02
The Programming Language Perl For Biologists written by Asheesh Shanker and has been published by GRIN Verlag this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-03-02 with Computers categories.
Document from the year 2015 in the subject Computer Science - Programming, , course: Bioinformatics, language: English, abstract: This book is designed to be useful in theory and practical classes of UG and PG bioinformatics students. Moreover, it will be beneficial to other persons who wish to learn Perl programming language. To explain the Perl jargon, program based approach is used throughout the book. Important points are provided at the end of each chapter along with questions to test the skills. Solutions of find errors are provided at the end of the book. All the programs are tested on Windows 7 with Perl v5.18.1. The book is divided into thirteen chapters which gradually take a reader from basic to advanced Perl. Although the book has been drafted with utmost care, it is quite possible that some errors/misprints might have crept in the book. I request the readers for their valuable suggestions and comments for further improvement of the book.
Perl Programming For Biologists
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Author : Jamison
language : en
Publisher:
Release Date : 2003-07-10
Perl Programming For Biologists written by Jamison and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-07-10 with categories.
Working on the assumption that the reader has no formal training in programming, "Perl Programming for Biologists" demonstrates how Perl is used to solve biological problems. Each chapter opens with a set of learning objectives, provides numerous review questions and self-study exercises, and concludes with a bulleted summary of key points. The author incorporates numerous real-life examples throughout the text. Upon completing the book, readers are able to quickly perform such tasks as correcting recurring errors in spreadsheets, scanning a Fasta sequence for every occurrence of an EcoRI site, adapting other writers' scripts to one's own purposes, and most important, writing reusable and maintainable scripts that spare the rote repetition of code.
Mastering Perl For Bioinformatics
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Author : James Tisdall
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2003-09-25
Mastering Perl For Bioinformatics written by James Tisdall and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-09-25 with Computers categories.
Historically, programming hasn't been considered a critical skill for biologists. But now, with access to vast amounts of biological data contained in public databases, programming skills are increasingly in strong demand in biology research and development. Perl, with its highly developed capacities in string handling, text processing, networking, and rapid prototyping, has emerged as the programming language of choice for biological data analysis.Mastering Perl for Bioinformatics covers the core Perl language and many of its module extensions, presenting them in the context of biological data and problems of pressing interest to the biological community. This book, along with Beginning Perl for Bioinformatics, forms a basic course in Perl programming. This second volume finishes the basic Perl tutorial material (references, complex data structures, object-oriented programming, use of modules--all presented in a biological context) and presents some advanced topics of considerable interest in bioinformatics.The range of topics covered in Mastering Perl for Bioinformatics prepares the reader for enduring and emerging developments in critical areas of bioinformatics programming such as: Gene finding String alignment Methods of data storage and retrieval (SML and databases) Modeling of networks (graphs and Petri nets) Graphics (Tk) Parallelization Interfacing with other programming languages Statistics (PDL) Protein structure determination Biological models of computation (DNA Computers) Biologists and computer scientists who have conquered the basics of Perl and are ready to move even further in their mastery of this versatile language will appreciate the author's well-balanced approach to applying Perl's analytical abilities to the field of bioinformatics. Full of practical examples and real-world biological problem solving, this book is a must for any reader wanting to move beyond beginner level Perl in bioinformatics.
Beginning Perl For Bioinformatics
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Author : James Tisdall
language : en
Publisher: "O'Reilly Media, Inc."
Release Date : 2001
Beginning Perl For Bioinformatics written by James Tisdall and has been published by "O'Reilly Media, Inc." this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001 with Computers categories.
This book shows biologists with little or no programming experience how to use Perl, the ideal language for biological data analysis. Each chapter focuses on solving a particular problem or class of problems, so you'll finish the book with the skills to tackle more advanced bioinformatics programming.
Perl Programming For Bioinformatics Biologists
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Author : D. Curtis Jamison
language : en
Publisher: John Wiley & Sons
Release Date : 2003-11-12
Perl Programming For Bioinformatics Biologists written by D. Curtis Jamison and has been published by John Wiley & Sons this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-11-12 with categories.
Working on the assumption that the reader has never had any formal training in programming, and using examples geared towards real problems faced by biologists, this text serves as a basic reference for teaching Perl programming. Through this text, readers will also gain code fragments that can recycle into their own programs.· An Introduction to Perl· Variables and Data Types· Arrays and Hashes· Control Structures· Subroutines· String Manipulation· Input and Output· Perl Modules and Packages· References· Object-Oriented Programming· Bioperl
Perl Programming For Biologists
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Author : Curt Jamison
language : en
Publisher:
Release Date : 2002-09-01
Perl Programming For Biologists written by Curt Jamison and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2002-09-01 with categories.
A detailed introduction to the PERL programming language with examples and applications in Bioinformatics.
Genomic Pearl 1b1cdr
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Author : Rex A Dwyer
language : en
Publisher:
Release Date : 2003
Genomic Pearl 1b1cdr written by Rex A Dwyer and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003 with categories.
This introduction to computational molecular biology will help programmers and biologists learn the skills needed to start work in this important, expanding field. The author explains many of the basic computational problems and gives concise, working programs to solve them in the Perl programming language. With minimal prerequisites, the author explains the biological background for each problem, develops a model for the solution, then introduces the Perl concepts needed to implement the solution. The book covers pairwise and multiple sequence alignment, fast database searches for homologous sequences, protein motif identification, genome rearrangement, physical mapping, phylogeny reconstruction, satellite identification, sequence assembly, gene finding, and RNA secondary structure. The concrete examples and step-by-step approach make it easy to grasp the computational and statistical methods, including dynamic programming, branch-and-bound optimization, greedy methods, maximum likelihood methods, substitution matrices, BLAST searching, and Karlin-Altschul statistics. Perl code is provided on the accompanying CD.
Beginning Perl For Bioinformatics
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Author : James Tisdall
language : en
Publisher:
Release Date : 2001-01-01
Beginning Perl For Bioinformatics written by James Tisdall and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001-01-01 with Computers categories.
Discusses the ties between biology and computer science, how to program, basic PERL programming concepts, and how to use PERL to perform tasks including analyzing genetic codes.
Perl Programming For Medicine And Biology
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Author : Jules J. Berman
language : en
Publisher: Jones & Bartlett Learning
Release Date : 2007
Perl Programming For Medicine And Biology written by Jules J. Berman and has been published by Jones & Bartlett Learning this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007 with Computers categories.
Written for biomedical professionals and hospital practitioners interested in creating their own programs, Perl Programming for Medicine and Biology, discusses and reviews biomedical data resources, data standards, data organization, medicolegal and ethical conduct for data miners, and grants-related data sharing responsibilities. It teaches readers the basic Perl programming skills necessary for collecting, analyzing, and distributing biomedical data and provides solutions to in-depth problems that face researchers and healthcare professionals. Non-technical "Background" sections open each chapter to help non-programmers easily comprehend programming procedures. Explanations are provided for the biomedical issues underlying the Perl scripts that follow, and examples of real-world implementation are provided. Perl Programming for Medicine and Biology will show you how to transform, merge, and examine large and complex databases with ease.