Computing For Biologists
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Computing For Biologists
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Author : Ran Libeskind-Hadas
language : en
Publisher:
Release Date : 2014
Computing For Biologists written by Ran Libeskind-Hadas and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014 with Biology categories.
Computing is revolutionizing the practice of biology. This book, which assumes no prior computing experience, provides students with the tools to write their own Python programs and to understand fundamental concepts in computational biology and bioinformatics. Each major part of the book begins with a compelling biological question, followed by the algorithmic ideas and programming tools necessary to explore it: the origins of pathogenicity are examined using gene finding, the evolutionary history of sex determination systems is studied using sequence alignment, and the origin of modern humans is addressed using phylogenetic methods. In addition to providing general programming skills, this book explores the design of efficient algorithms, simulation, NP-hardness, and the maximum likelihood method, among other key concepts and methods. Easy-to-read and designed to equip students with the skills to write programs for solving a range of biological problems, the book is accompanied by numerous programming exercises, available at www.cs.hmc.edu/CFB.
Computing For Biologists
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Author : Alan Fielding
language : en
Publisher:
Release Date : 1985
Computing For Biologists written by Alan Fielding and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 1985 with BASIC (Computer program language) categories.
Computing For Biologists
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Author : Ran Libeskind-Hadas
language : en
Publisher: Cambridge University Press
Release Date : 2014-09-22
Computing For Biologists written by Ran Libeskind-Hadas and has been published by Cambridge University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2014-09-22 with Computers categories.
This book teaches life science students how to use Python programming and computational problem-solving in the context of compelling biological applications.
Computing Skills For Biologists
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Author : Stefano Allesina
language : en
Publisher: Princeton University Press
Release Date : 2019-01-15
Computing Skills For Biologists written by Stefano Allesina and has been published by Princeton University Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2019-01-15 with Computers categories.
A concise introduction to key computing skills for biologists While biological data continues to grow exponentially in size and quality, many of today’s biologists are not trained adequately in the computing skills necessary for leveraging this information deluge. In Computing Skills for Biologists, Stefano Allesina and Madlen Wilmes present a valuable toolbox for the effective analysis of biological data. Based on the authors’ experiences teaching scientific computing at the University of Chicago, this textbook emphasizes the automation of repetitive tasks and the construction of pipelines for data organization, analysis, visualization, and publication. Stressing practice rather than theory, the book’s examples and exercises are drawn from actual biological data and solve cogent problems spanning the entire breadth of biological disciplines, including ecology, genetics, microbiology, and molecular biology. Beginners will benefit from the many examples explained step-by-step, while more seasoned researchers will learn how to combine tools to make biological data analysis robust and reproducible. The book uses free software and code that can be run on any platform. Computing Skills for Biologists is ideal for scientists wanting to improve their technical skills and instructors looking to teach the main computing tools essential for biology research in the twenty-first century. Excellent resource for acquiring comprehensive computing skills Both novice and experienced scientists will increase efficiency by building automated and reproducible pipelines for biological data analysis Code examples based on published data spanning the breadth of biological disciplines Detailed solutions provided for exercises in each chapter Extensive companion website
Computing For Biologists
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Author : Alan Fielding
language : en
Publisher: Benjamin-Cummings Publishing Company
Release Date : 1985
Computing For Biologists written by Alan Fielding and has been published by Benjamin-Cummings Publishing Company this book supported file pdf, txt, epub, kindle and other format this book has been release on 1985 with Reference categories.
Essential Computing Skills For Biologists
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Author : Ziling Wang
language : en
Publisher: World Scientific
Release Date : 2018-07-02
Essential Computing Skills For Biologists written by Ziling Wang and has been published by World Scientific this book supported file pdf, txt, epub, kindle and other format this book has been release on 2018-07-02 with Science categories.
This is a handbook of methods and protocols for biologists. It aimed at undergraduate, graduate students and researchers originally trained in biological or medical sciences who need to know how to access the data archives of genomes, proteins, metabolites, gene expression profiles and the questions these data and tools can answer. For each chapter, the conceptual and experimental background is provided, together with specific guidelines for handling raw data, including preprocessing and analysis.The content is structured into three parts. Part one introduces basic knowledge about popular bioinformatics tools, databases and web resources. Part two presents examples of omics bioinformatics applications. Part three provides basic statistical analysis skills and programming skills needed to handle and analyze omics datasets.
Catalyzing Inquiry At The Interface Of Computing And Biology
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Author : National Research Council
language : en
Publisher: National Academies Press
Release Date : 2006-01-01
Catalyzing Inquiry At The Interface Of Computing And Biology written by National Research Council and has been published by National Academies Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2006-01-01 with Science categories.
Advances in computer science and technology and in biology over the last several years have opened up the possibility for computing to help answer fundamental questions in biology and for biology to help with new approaches to computing. Making the most of the research opportunities at the interface of computing and biology requires the active participation of people from both fields. While past attempts have been made in this direction, circumstances today appear to be much more favorable for progress. To help take advantage of these opportunities, this study was requested of the NRC by the National Science Foundation, the Department of Defense, the National Institutes of Health, and the Department of Energy. The report provides the basis for establishing cross-disciplinary collaboration between biology and computing including an analysis of potential impediments and strategies for overcoming them. The report also presents a wealth of examples that should encourage students in the biological sciences to look for ways to enable them to be more effective users of computing in their studies.
Practical Computing For Biologists
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Author : Steven H.D. Haddock
language : en
Publisher: Sinauer
Release Date : 2011-04-22
Practical Computing For Biologists written by Steven H.D. Haddock and has been published by Sinauer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011-04-22 with Medical categories.
Practical Computing for Biologists shows you how to use many freely available computing tools to work more powerfully and effectively. The book was born out of the authors' own experience in developing tools for their research and helping other biologists with their computational problems. Many of the techniques are relevant to molecular bioinformatics but the scope of the book is much broader, covering topics and techniques that are applicable to a range of scientific endeavours. Twenty-two chapters organized into six parts address the following topics (and more; see Contents): • Searching with regular expressions • The Unix command line • Python programming and debugging • Creating and editing graphics • Databases • Performing analyses on remote servers • Working with electronics While the main narrative focuses on Mac OS X, most of the concepts and examples apply to any operating system. Where there are differences for Windows and Linux users, parallel instructions are provided in the margin and in an appendix. The book is designed to be used as a self-guided resource for researchers, a companion book in a course, or as a primary textbook. Practical Computing for Biologists will free you from the most frustrating and time-consuming aspects of data processing so you can focus on the pleasures of scientific inquiry.
Life Out Of Sequence
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Author : Hallam Stevens
language : en
Publisher: University of Chicago Press
Release Date : 2013-11-04
Life Out Of Sequence written by Hallam Stevens and has been published by University of Chicago Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2013-11-04 with Science categories.
Thirty years ago, the most likely place to find a biologist was standing at a laboratory bench, peering down a microscope, surrounded by flasks of chemicals and petri dishes full of bacteria. Today, you are just as likely to find him or her in a room that looks more like an office, poring over lines of code on computer screens. The use of computers in biology has radically transformed who biologists are, what they do, and how they understand life. In Life Out of Sequence, Hallam Stevens looks inside this new landscape of digital scientific work. Stevens chronicles the emergence of bioinformatics—the mode of working across and between biology, computing, mathematics, and statistics—from the 1960s to the present, seeking to understand how knowledge about life is made in and through virtual spaces. He shows how scientific data moves from living organisms into DNA sequencing machines, through software, and into databases, images, and scientific publications. What he reveals is a biology very different from the one of predigital days: a biology that includes not only biologists but also highly interdisciplinary teams of managers and workers; a biology that is more centered on DNA sequencing, but one that understands sequence in terms of dynamic cascades and highly interconnected networks. Life Out of Sequence thus offers the computational biology community welcome context for their own work while also giving the public a frontline perspective of what is going on in this rapidly changing field.
Cloud Computing For Biologists
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Author :
language : en
Publisher:
Release Date : 2011
Cloud Computing For Biologists written by and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2011 with Cloud computing categories.