Bioinformatics Sequence Alignment And Markov Models
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Bioinformatics
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Author : Kal Renganathan Sharma
language : en
Publisher:
Release Date : 2009
Bioinformatics written by Kal Renganathan Sharma and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2009 with Bioinformatics categories.
Protein Homology Detection Through Alignment Of Markov Random Fields
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Author : Jinbo Xu
language : en
Publisher: Springer
Release Date : 2015-01-22
Protein Homology Detection Through Alignment Of Markov Random Fields written by Jinbo Xu and has been published by Springer this book supported file pdf, txt, epub, kindle and other format this book has been release on 2015-01-22 with Computers categories.
This work covers sequence-based protein homology detection, a fundamental and challenging bioinformatics problem with a variety of real-world applications. The text first surveys a few popular homology detection methods, such as Position-Specific Scoring Matrix (PSSM) and Hidden Markov Model (HMM) based methods, and then describes a novel Markov Random Fields (MRF) based method developed by the authors. MRF-based methods are much more sensitive than HMM- and PSSM-based methods for remote homolog detection and fold recognition, as MRFs can model long-range residue-residue interaction. The text also describes the installation, usage and result interpretation of programs implementing the MRF-based method.
Handbook Of Hidden Markov Models In Bioinformatics
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Author : Martin Gollery
language : en
Publisher: CRC Press
Release Date : 2008-06-12
Handbook Of Hidden Markov Models In Bioinformatics written by Martin Gollery and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2008-06-12 with Computers categories.
Demonstrating that many useful resources, such as databases, can benefit most bioinformatics projects, the Handbook of Hidden Markov Models in Bioinformatics focuses on how to choose and use various methods and programs available for hidden Markov models (HMMs). The book begins with discussions on key HMM and related profile methods, incl
Medinfo 2007
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Author : Klaus A. Kuhn
language : en
Publisher: IOS Press
Release Date : 2007
Medinfo 2007 written by Klaus A. Kuhn and has been published by IOS Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2007 with Medical categories.
The papers presented are refereed and from all over the world. They reflect the breadth and depth of the field of biomedical and health informatics, covering topics such as; health information systems, knowledge and data management, education, standards, consumer health and human factors, emerging technologies, sustainability, organizational and economic issues, genomics, and image and signal processing. As this volume carries such a wide collection, it will be of great interest to anyone engaged in biomedical and health informatics research and application.
Hidden Markov Models For Bioinformatics
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Author : T. Koski
language : en
Publisher: Springer Science & Business Media
Release Date : 2001-11-30
Hidden Markov Models For Bioinformatics written by T. Koski and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2001-11-30 with Mathematics categories.
The purpose of this book is to give a thorough and systematic introduction to probabilistic modeling in bioinformatics. The book contains a mathematically strict and extensive presentation of the kind of probabilistic models that have turned out to be useful in genome analysis. Questions of parametric inference, selection between model families, and various architectures are treated. Several examples are given of known architectures (e.g., profile HMM) used in genome analysis. Audience: This book will be of interest to advanced undergraduate and graduate students with a fairly limited background in probability theory, but otherwise well trained in mathematics and already familiar with at least some of the techniques of algorithmic sequence analysis.
Life System Modeling And Intelligent Computing
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Author : Kang Li
language : en
Publisher: Springer Science & Business Media
Release Date : 2010-09-02
Life System Modeling And Intelligent Computing written by Kang Li and has been published by Springer Science & Business Media this book supported file pdf, txt, epub, kindle and other format this book has been release on 2010-09-02 with Computers categories.
The 2010 International Conference on Life System Modeling and Simulation (LSMS 2010) and the 2010 International Conference on Intelligent Computing for Sustainable Energy and Environment (ICSEE 2010) were formed to bring together researchers and practitioners in the fields of life system modeling/simulation and intelligent computing applied to worldwide sustainable energy and environmental applications. A life system is a broad concept, covering both micro and macro components ra- ing from cells, tissues and organs across to organisms and ecological niches. To c- prehend and predict the complex behavior of even a simple life system can be - tremely difficult using conventional approaches. To meet this challenge, a variety of new theories and methodologies have emerged in recent years on life system modeling and simulation. Along with improved understanding of the behavior of biological systems, novel intelligent computing paradigms and techniques have emerged to h- dle complicated real-world problems and applications. In particular, intelligent c- puting approaches have been valuable in the design and development of systems and facilities for achieving sustainable energy and a sustainable environment, the two most challenging issues currently facing humanity. The two LSMS 2010 and ICSEE 2010 conferences served as an important platform for synergizing these two research streams.
Mastering Data Mining Techniques
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Author : Dhaanyalakshmi Ahuja
language : en
Publisher: Educohack Press
Release Date : 2025-01-03
Mastering Data Mining Techniques written by Dhaanyalakshmi Ahuja and has been published by Educohack Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2025-01-03 with Computers categories.
The illustrations in this book are created by “Team Educohack”. Mastering Data Mining Techniques is your comprehensive guide to extracting valuable insights from corporate databases. This book demonstrates how data mining has evolved into an essential tool for modern business, with updates and revisions to all chapters, plus new additions. We provide clear explanations of complex topics using concise language, minimizing jargon and formulas. Technical subjects are illustrated with real-world examples and case studies, offering practical tips for marketing analysts, business managers, and data mining professionals. We cover linear and logistic regression, clustering methods, and an overview of data mining applications, establishing a business context and methodologies common to all projects. Data mining is a crucial step in the KDD process, used for conceptual explanations, related analysis, model construction, data clustering, and time-series trend modeling. We emphasize the importance of measures of interest, detailing their relevance and guiding the data mining process. The book also explores data warehousing and multidimensional databases as interlayers between data sources, allowing integration of online analytical processing and data mining. Starting with an overview of data warehousing concepts, we propose an integrated OLAM architecture.
Encyclopedia Of Library And Information Science Second Edition
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Author : Miriam Drake
language : en
Publisher: CRC Press
Release Date : 2003-05-20
Encyclopedia Of Library And Information Science Second Edition written by Miriam Drake and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2003-05-20 with Language Arts & Disciplines categories.
A revitalized version of the popular classic, the Encyclopedia of Library and Information Science, Second Edition targets new and dynamic movements in the distribution, acquisition, and development of print and online media-compiling articles from more than 450 information specialists on topics including program planning in the digital era, recruitment, information management, advances in digital technology and encoding, intellectual property, and hardware, software, database selection and design, competitive intelligence, electronic records preservation, decision support systems, ethical issues in information, online library instruction, telecommuting, and digital library projects.
Particle Swarm Optimisation
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Author : Jun Sun
language : en
Publisher: CRC Press
Release Date : 2016-04-19
Particle Swarm Optimisation written by Jun Sun and has been published by CRC Press this book supported file pdf, txt, epub, kindle and other format this book has been release on 2016-04-19 with Computers categories.
Although the particle swarm optimisation (PSO) algorithm requires relatively few parameters and is computationally simple and easy to implement, it is not a globally convergent algorithm. In Particle Swarm Optimisation: Classical and Quantum Perspectives, the authors introduce their concept of quantum-behaved particles inspired by quantum mechanics, which leads to the quantum-behaved particle swarm optimisation (QPSO) algorithm. This globally convergent algorithm has fewer parameters, a faster convergence rate, and stronger searchability for complex problems. The book presents the concepts of optimisation problems as well as random search methods for optimisation before discussing the principles of the PSO algorithm. Examples illustrate how the PSO algorithm solves optimisation problems. The authors also analyse the reasons behind the shortcomings of the PSO algorithm. Moving on to the QPSO algorithm, the authors give a thorough overview of the literature on QPSO, describe the fundamental model for the QPSO algorithm, and explore applications of the algorithm to solve typical optimisation problems. They also discuss some advanced theoretical topics, including the behaviour of individual particles, global convergence, computational complexity, convergence rate, and parameter selection. The text closes with coverage of several real-world applications, including inverse problems, optimal design of digital filters, economic dispatch problems, biological multiple sequence alignment, and image processing. MATLAB®, Fortran, and C++ source codes for the main algorithms are provided on an accompanying downloadable resources. Helping you numerically solve optimisation problems, this book focuses on the fundamental principles and applications of PSO and QPSO algorithms. It not only explains how to use the algorithms, but also covers advanced topics that establish the groundwork for understanding.
Evaluation Of Sam T99 As A Multiple Sequence Alignment Program Using Balibase Test Set
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Author : Birong Hu
language : en
Publisher:
Release Date : 2000
Evaluation Of Sam T99 As A Multiple Sequence Alignment Program Using Balibase Test Set written by Birong Hu and has been published by this book supported file pdf, txt, epub, kindle and other format this book has been release on 2000 with Proteins categories.